References

309

22.5

Overcoming Noise

Most signalling pathways depend on small numbers of molecules interacting with

each other, hence the outcome is likely to be affected by stochastic noise. This

was examined some time ago in eukaryotic gene expression, 12 but noise in ligand–

receptor binding has received less attention. Pierobon and Akyildiz (2011) have

carried out an initial study of noise in a realistic diffusion-based molecular com-

munication system. The advantage of requiring multiple ligand–receptor binding

events to trigger an effect for noise suppression (i.e., increasing molecular detection

efficiency) has been described in Sect. 14.6.

References

Abshire PA, Andreou AG (2001) A communication channel model for information transmission in

the blowfly photoreceptor. Biosystems 62:113–133

Akhtar A, Gasser SM (2007) The nuclear envelope and transcriptional control. Nat Rev Genetics

8:507–517

Ashby WR (1958) Requisite variety and its implications for the control of complex systems. Cursos

Congr Univ Santiago de Compostela 1:189–201

Blake WJ, Kaern M, Cantor CR, Collins JJ (2003) Noise in eukaryotic gene expression. Nature

422:633–637

Blumenfeld LA (1981) Problems of biological physics. Springer, Berlin

Eckford AW, Thomas PJ (2018) The channel capacity of channelrhodopsin and other intensity-

driven signal transduction receptors. IEEE Trans Molec Biol Multi-Scale Commun 4:27–38

Fisher MJ, Malcolm G, Paton RC (2000) Spatio-logical processes in intracellular signalling. Biosys-

tems 55:83–92

Forgacs G (1995) On the possible role of cytoskeletal filamentous networks in intracellular signaling:

an approach based on percolation. J Cell Sci 108:2131–2143

Hlavacek WS, Faeder JR, Blinov ML, Posner RG, Hucka M and Fontana W (2006) Rules for

modeling signal-transduction systems. Sci STKE 2006:re6

Krauss G (2008) Biochemistry of signal transduction and regulation, 4th edn. Wiley-VCH, Wein-

heim

Péter B, Boldizsár I, Kovács GM, Erdei A, Bajtay Z, Vörös A, Ramsden JJ, Szabó I, B˝osze S, Horvath

R (2021) Natural compounds as target biomolecules in cellular adhesion and migration: from

biomolecular stimulation to label-free discovery and bioactivity-based isolation. Biomedicines

9:1781

Pierobon M, Akyildiz IF (2011) Noise analysis in ligand-binding reception for molecular commu-

nication in nanonetworks. IEEE Trans Signal Process 59:4168–4182

Ramsden JJ, Vohradský J (1998) Zipf-like behavior in procaryotic protein expression. Phys Rev E

58:7777–7780

Raser JM, O’Shea EK (2005) Noise in gene expression: origins, consequences, and control. Science

309:2010–2013

Shafrir Y, ben-Avraham D, Forgacs G, (2000) Trafficking and signaling through the cytoskeleton:

a specific mechanism. J Cell Sci 113:2747–2757

12 Blake et al. (2003), Raser and O’Shea (2005).